PH01000429G0160's details annotation
1.Annotation
ICBR annotation: ubiquitin domain-containing protein 2, putative, expressed
Blast result AT1G53400 : 3.50E-47
Blast annotation: Ubiquitin domain-containing protein
2.Location
Scaffold: PH01000429
Strand: -
| Region | Start | End |
| gene | 91829 | 96313 |
| mRNA | 91829 | 96313 |
| exon | 91829 | 93775 |
| exon | 93888 | 94007 |
| exon | 94639 | 94761 |
| exon | 95472 | 95570 |
| exon | 95904 | 96313 |
| CDS | 93711 | 93775 |
| CDS | 93888 | 94007 |
| CDS | 94639 | 94761 |
| CDS | 95472 | 95570 |
| CDS | 95904 | 95937 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF16455.4 | UBD | 14 | 112 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.