PH01000431G0910's details annotation
1.Annotation
ICBR annotation: transmembrane 9 superfamily member, putative, expressed
Blast result AT4G12650 : 0.00E+00
Blast annotation: Endomembrane protein 70 protein family
2.Location
Scaffold: PH01000431
Strand: -
| Region | Start | End |
| gene | 613339 | 615595 |
| mRNA | 613339 | 615595 |
| exon | 613339 | 615595 |
| CDS | 613586 | 615547 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM001404 | integral to membrane, CMGC_DYRK-PRP4 (from iTAK) |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF02990.15 | EMP70 | 55 | 605 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016021 | integral to membrane |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.