PH01000436G0290's details annotation
1.Annotation
ICBR annotation: bacterial transferase hexapeptide domain containing protein, expressed
Blast result AT1G47260 : 2.00E-123
Blast annotation: gamma carbonic anhydrase 2
2.Location
Scaffold: PH01000436
Strand: +
| Region | Start | End |
| gene | 202269 | 208367 |
| mRNA | 202269 | 208367 |
| exon | 202269 | 202470 |
| exon | 203286 | 203429 |
| exon | 204815 | 204940 |
| exon | 205184 | 205335 |
| exon | 205819 | 208367 |
| CDS | 202356 | 202470 |
| CDS | 203286 | 203429 |
| CDS | 204815 | 204940 |
| CDS | 205184 | 205335 |
| CDS | 205819 | 206103 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00132.23 | Hexapep | 53 | 87 |
| PF00132.23 | Hexapep | 137 | 170 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016740 | transferase activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.