PH01000442G0300's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT2G47115 : 1.70E-59
Blast annotation: -
2.Location
Scaffold: PH01000442
Strand: -
| Region | Start | End |
| gene | 166064 | 170236 |
| mRNA | 166064 | 170236 |
| exon | 166064 | 166563 |
| exon | 166643 | 166690 |
| exon | 167423 | 167517 |
| exon | 167597 | 167662 |
| exon | 168209 | 168298 |
| exon | 168758 | 168991 |
| exon | 169144 | 169177 |
| exon | 169581 | 170236 |
| CDS | 166407 | 166563 |
| CDS | 166643 | 166690 |
| CDS | 167423 | 167517 |
| CDS | 167597 | 167662 |
| CDS | 168209 | 168298 |
| CDS | 168758 | 168991 |
| CDS | 169144 | 169177 |
| CDS | 169581 | 169978 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016021 | integral to membrane |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.