PH01000447G0290's details annotation
1.Annotation
ICBR annotation: dehydrin, putative, expressed
Blast result AT1G20450 : 5.60E-21
Blast annotation: Dehydrin family protein
2.Location
Scaffold: PH01000447
Strand: -
| Region | Start | End |
| gene | 203831 | 205613 |
| mRNA | 203831 | 205613 |
| exon | 203831 | 205111 |
| exon | 205241 | 205613 |
| CDS | 204599 | 205111 |
| CDS | 205241 | 205510 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00257.18 | Dehydrin | 44 | 160 |
| PF00257.18 | Dehydrin | 175 | 238 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0006950 | response to stress |
| GO:0009415 | response to water stimulus |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.