PH01000447G0520's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT2G17110 : 4.00E-96
Blast annotation: Protein of unknown function (DUF630 and DUF632)
2.Location
Scaffold: PH01000447
Strand: +
| Region | Start | End |
| gene | 358651 | 362842 |
| mRNA | 358651 | 362842 |
| exon | 358651 | 359110 |
| exon | 359411 | 359931 |
| exon | 360024 | 360184 |
| exon | 360837 | 361060 |
| exon | 361522 | 362842 |
| CDS | 358701 | 359110 |
| CDS | 359411 | 359931 |
| CDS | 360024 | 360184 |
| CDS | 360837 | 361060 |
| CDS | 361522 | 362251 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF04783.11 | DUF630 | 1 | 54 |
| PF04782.11 | DUF632 | 272 | 568 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.