PH01000456G0330's details annotation
1.Annotation
ICBR annotation: chaperonin, putative, expressed
Blast result AT1G14980 : 3.40E-34
Blast annotation: chaperonin 10
2.Location
Scaffold: PH01000456
Strand: +
| Region | Start | End |
| gene | 226144 | 229332 |
| mRNA | 226144 | 229332 |
| exon | 226144 | 226347 |
| exon | 228359 | 228498 |
| exon | 229147 | 229332 |
| CDS | 226243 | 226347 |
| CDS | 228359 | 228498 |
| CDS | 229147 | 229195 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00166.20 | Cpn10 | 6 | 93 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005737 | cytoplasm |
| GO:0006457 | protein folding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.