PH01000509G1080's details annotation
1.Annotation
ICBR annotation: glycosyl transferase family 17 protein, putative, expressed
Blast result AT3G27540 : 1.00E-170
Blast annotation: beta-1,4-N-acetylglucosaminyltransferase family protein
2.Location
Scaffold: PH01000509
Strand: +
| Region | Start | End |
| gene | 618719 | 621778 |
| mRNA | 618719 | 621778 |
| exon | 618719 | 619205 |
| exon | 620353 | 621778 |
| CDS | 619140 | 619205 |
| CDS | 620353 | 621453 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF04724.12 | Glyco_transf_17 | 42 | 386 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| N-Glycan biosynthesis | beta-1,4-mannosyl-glycoproteinbeta-1,4-N-acetylglucosaminyltransferase[EC:2.4.1.144] | ko00510 | K00737 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003830 | beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity |
| GO:0006487 | protein N-linked glycosylation |
| GO:0016020 | membrane |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.