PH01000510G0710's details annotation
1.Annotation
ICBR annotation: auxilin, putative, expressed
Blast result AT4G12780 : 2.10E-77
Blast annotation: Chaperone DnaJ-domain superfamily protein
2.Location
Scaffold: PH01000510
Strand: -
| Region | Start | End |
| gene | 494279 | 504771 |
| mRNA | 494279 | 504771 |
| exon | 494279 | 495535 |
| exon | 496538 | 496714 |
| exon | 497042 | 497131 |
| exon | 497320 | 497385 |
| exon | 497571 | 497668 |
| exon | 497755 | 497875 |
| exon | 497963 | 499520 |
| exon | 503365 | 503501 |
| exon | 503765 | 504771 |
| CDS | 495497 | 495535 |
| CDS | 496538 | 496714 |
| CDS | 497042 | 497131 |
| CDS | 497320 | 497385 |
| CDS | 497571 | 497668 |
| CDS | 497755 | 497875 |
| CDS | 497963 | 499520 |
| CDS | 503365 | 503501 |
| CDS | 503765 | 504280 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.