PH01000515G0330's details annotation
1.Annotation
ICBR annotation: FAD-linked oxidoreductase protein, putative, expressed
Blast result AT5G06580 : 1.40E-29
Blast annotation: FAD-linked oxidases family protein
2.Location
Scaffold: PH01000515
Strand: -
| Region | Start | End |
| gene | 229484 | 231274 |
| mRNA | 229484 | 231274 |
| exon | 229484 | 229620 |
| exon | 229880 | 229933 |
| exon | 230041 | 230141 |
| exon | 230272 | 230365 |
| exon | 230459 | 231274 |
| CDS | 229563 | 229620 |
| CDS | 229880 | 229933 |
| CDS | 230041 | 230141 |
| CDS | 230272 | 230365 |
| CDS | 230459 | 230676 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003824 | catalytic activity |
| GO:0008762 | UDP-N-acetylmuramate dehydrogenase activity |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.