PH01000516G0310's details annotation
1.Annotation
ICBR annotation: formin-like protein 6 precursor, putative, expressed
Blast result AT5G67470 : 5.00E-150
Blast annotation: formin homolog 6
2.Location
Scaffold: PH01000516
Strand: -
| Region | Start | End |
| gene | 255574 | 260952 |
| mRNA | 255574 | 260952 |
| exon | 255574 | 256527 |
| exon | 257373 | 257614 |
| exon | 258612 | 258811 |
| exon | 258906 | 260952 |
| CDS | 255739 | 256527 |
| CDS | 257373 | 257614 |
| CDS | 258612 | 258811 |
| CDS | 258906 | 259060 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF02181.22 | FH2 | 25 | 410 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003779 | actin binding |
| GO:0016043 | cellular component organization |
| GO:0030036 | actin cytoskeleton organization |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.