PH01000525G0570's details annotation
1.Annotation
ICBR annotation: sufB/sufD domain containing protein, putative, expressed
Blast result AT1G32500 : 3.90E-83
Blast annotation: non-intrinsic ABC protein 6
2.Location
Scaffold: PH01000525
Strand: +
| Region | Start | End |
| gene | 415675 | 418636 |
| mRNA | 415675 | 418636 |
| exon | 415675 | 416695 |
| exon | 417427 | 417686 |
| exon | 418202 | 418636 |
| CDS | 416420 | 416695 |
| CDS | 417427 | 417686 |
| CDS | 418202 | 418523 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01458.16 | UPF0051 | 23 | 252 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016226 | iron-sulfur cluster assembly |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.