Gene details

Annotation of co-expression genes

PH01000529G0830's details annotation

1.Annotation

ICBR annotation: ras-related protein, putative, expressed

Blast result AT4G17170 : 9.00E-103
Blast annotation: RAB GTPase homolog B1C

2.Location

Scaffold: PH01000529
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	details
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM001080	nucleocytoplasmic transport, small GTPase mediated signal transduction, GTP_catabolic_process protein transport, GTPase activity, signal transduction, GTP binding, intracellular protein transport, intracellular, membrane,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

Pfam Accession	Pfam Annotation	Alignment Start	Alignment Start
PF00071.21	Ras	8	168

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0003924	GTPase activity
GO:0005525	GTP binding
GO:0005622	intracellular
GO:0006184	GTP catabolic process
GO:0006886	intracellular protein transport
GO:0006913	nucleocytoplasmic transport
GO:0007165	signal transduction
GO:0007264	small GTPase mediated signal transduction
GO:0015031	protein transport
GO:0016020	membrane

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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