PH01000531G0200's details annotation
1.Annotation
ICBR annotation: mitochondrial-processing peptidase subunit, mitochondrial precursor, putative, expressed
Blast result AT3G02090 : 0.00E+00
Blast annotation: Insulinase (Peptidase family M16) protein
2.Location
Scaffold: PH01000531
Strand: +
| Region | Start | End |
| gene | 121180 | 126160 |
| mRNA | 121180 | 126160 |
| exon | 121180 | 122125 |
| exon | 122853 | 123017 |
| exon | 123143 | 123280 |
| exon | 123360 | 123511 |
| exon | 123636 | 123744 |
| exon | 124704 | 124802 |
| exon | 125259 | 125357 |
| exon | 125605 | 125670 |
| exon | 125759 | 125866 |
| exon | 125909 | 126160 |
| CDS | 121460 | 122125 |
| CDS | 122853 | 123017 |
| CDS | 123143 | 123280 |
| CDS | 123360 | 123511 |
| CDS | 123636 | 123744 |
| CDS | 124704 | 124802 |
| CDS | 125259 | 125357 |
| CDS | 125605 | 125670 |
| CDS | 125759 | 125866 |
| CDS | 125909 | 125989 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM001675 | GT47 GlycosylTransferases dephosphorylation, Butanoate_metabolism oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor, Pyruvate_metabolism Citrate_cycle_(TCA_cycle) Glycolysis_/_Gluconeogenesis |
| coexpression network | CFinderM001766 | proton-transporting ATP synthase complex, catalytic core F(1), mitochondrial proton-transporting ATP synthase complex, catalytic core F(1), proton-transporting two-sector ATPase complex, catalytic domain, mitochondrial outer membrane, ATP metabolic process, anion transport, ATP biosynthetic process, ATP_catabolic_process regulation_of_anion_transport proton transport, ATP synthesis coupled proton transport, fructose-bisphosphate aldolase activity, voltage-gated anion channel activity, ATP hydrolysis coupled proton transport, hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances, hydrogen ion transporting ATP synthase activity, rotational mechanism, |
| coexpression network | CFinderM001800 | proton-transporting ATP synthase complex, catalytic core F(1), proton-transporting two-sector ATPase complex, catalytic domain, hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances, hydrogen ion transporting ATP synthase activity, rotational mechanism, ATP synthesis coupled proton transport, ATP hydrolysis coupled proton transport, mitochondrial proton-transporting ATP synthase complex, catalytic core F(1), ATP biosynthetic process, ATP metabolic process, ATP_catabolic_process proton transport, nucleoside-triphosphatase activity, double-stranded RNA binding, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00675.19 | Peptidase_M16 | 105 | 251 |
| PF05193.20 | Peptidase_M16_C | 258 | 443 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003824 | catalytic activity |
| GO:0004222 | metalloendopeptidase activity |
| GO:0006508 | proteolysis |
| GO:0046872 | metal ion binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.