PH01000565G0150's details annotation
1.Annotation
ICBR annotation: D-mannose binding lectin family protein
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01000565
Strand: +
| Region | Start | End |
| gene | 90480 | 94142 |
| mRNA | 90480 | 94142 |
| exon | 90480 | 90738 |
| exon | 91017 | 91150 |
| exon | 91286 | 91482 |
| exon | 91947 | 92044 |
| exon | 92149 | 92504 |
| exon | 92945 | 94142 |
| CDS | 90654 | 90738 |
| CDS | 91017 | 91150 |
| CDS | 91286 | 91482 |
| CDS | 91947 | 92044 |
| CDS | 92149 | 92504 |
| CDS | 92945 | 92962 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000277 | Valine,_leucine_and_isoleucine_biosynthesis Alanine,_aspartate_and_glutamate_metabolism SNARE_interactions_in_vesicular_transport fructose-bisphosphate aldolase activity, glycolysis, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.