PH01000567G0170's details annotation
1.Annotation
ICBR annotation: heavy metal-associated domain containing protein
Blast result AT1G66240 : 1.60E-26
Blast annotation: homolog of anti-oxidant 1
2.Location
Scaffold: PH01000567
Strand: +
| Region | Start | End |
| gene | 161240 | 164379 |
| mRNA | 161240 | 164379 |
| exon | 161240 | 161471 |
| exon | 162789 | 162864 |
| exon | 163496 | 163558 |
| exon | 164040 | 164379 |
| CDS | 161352 | 161471 |
| CDS | 162789 | 162864 |
| CDS | 163496 | 163558 |
| CDS | 164040 | 164206 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0030001 | metal ion transport |
| GO:0046872 | metal ion binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.