PH01000573G0150's details annotation
1.Annotation
ICBR annotation: YT521-B, putative, expressed
Blast result AT3G13060 : 1.00E-122
Blast annotation: evolutionarily conserved C-terminal region 5
2.Location
Scaffold: PH01000573
Strand: +
| Region | Start | End |
| gene | 146097 | 151103 |
| mRNA | 146097 | 151103 |
| exon | 146097 | 146649 |
| exon | 147545 | 147618 |
| exon | 147699 | 147873 |
| exon | 148227 | 148303 |
| exon | 148383 | 148686 |
| exon | 148811 | 148878 |
| exon | 149059 | 149547 |
| exon | 149710 | 149922 |
| exon | 150237 | 151103 |
| CDS | 146613 | 146649 |
| CDS | 147545 | 147618 |
| CDS | 147699 | 147873 |
| CDS | 148227 | 148303 |
| CDS | 148383 | 148686 |
| CDS | 148811 | 148878 |
| CDS | 149059 | 149547 |
| CDS | 149710 | 149922 |
| CDS | 150237 | 150602 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF04146.14 | YTH | 356 | 493 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.