PH01000597G0680's details annotation
1.Annotation
ICBR annotation: peptidyl-tRNA hydrolase, putative, expressed
Blast result AT5G16870 : 8.00E-13
Blast annotation: Peptidyl-tRNA hydrolase II (PTH2) family protein
2.Location
Scaffold: PH01000597
Strand: +
| Region | Start | End |
| gene | 525503 | 527785 |
| mRNA | 525503 | 527785 |
| exon | 525503 | 527188 |
| exon | 527296 | 527354 |
| exon | 527399 | 527785 |
| CDS | 526793 | 527188 |
| CDS | 527296 | 527354 |
| CDS | 527399 | 527627 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01981.15 | PTH2 | 131 | 153 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0004045 | aminoacyl-tRNA hydrolase activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.