PH01000602G0120's details annotation
1.Annotation
ICBR annotation: sodium/hydrogen exchanger 7, putative, expressed
Blast result AT2G01980 : 2.80E-57
Blast annotation: sodium proton exchanger, putative (NHX7) (SOS1)
2.Location
Scaffold: PH01000602
Strand: -
| Region | Start | End |
| gene | 80693 | 87790 |
| mRNA | 80693 | 87790 |
| exon | 80693 | 82179 |
| exon | 82414 | 82497 |
| exon | 82949 | 83215 |
| exon | 83341 | 83642 |
| exon | 83957 | 84215 |
| exon | 85275 | 85481 |
| exon | 85944 | 86075 |
| exon | 86660 | 87790 |
| CDS | 81679 | 82179 |
| CDS | 82414 | 82497 |
| CDS | 82949 | 83215 |
| CDS | 83341 | 83642 |
| CDS | 83957 | 84215 |
| CDS | 85275 | 85481 |
| CDS | 85944 | 86075 |
| CDS | 86660 | 86872 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.