PH01000604G0660's details annotation
1.Annotation
ICBR annotation: methyltransferase domain containing protein, putative, expressed
Blast result AT5G57300 : 6.00E-115
Blast annotation: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
2.Location
Scaffold: PH01000604
Strand: +
| Region | Start | End |
| gene | 371968 | 377183 |
| mRNA | 371968 | 377183 |
| exon | 371968 | 373443 |
| exon | 373521 | 373647 |
| exon | 373726 | 373787 |
| exon | 374620 | 374775 |
| exon | 374862 | 375006 |
| exon | 375295 | 375366 |
| exon | 376518 | 376626 |
| exon | 376817 | 377183 |
| CDS | 373326 | 373443 |
| CDS | 373521 | 373647 |
| CDS | 373726 | 373787 |
| CDS | 374620 | 374775 |
| CDS | 374862 | 375006 |
| CDS | 375295 | 375366 |
| CDS | 376518 | 376626 |
| CDS | 376817 | 376942 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01209.17 | Ubie_methyltran | 48 | 303 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Ubiquinone and other terpenoid-quinone biosynthesis | ubiquinone biosynthesis methyltransferase [EC:2.1.1.201] | ko00130 | K06127 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0008168 | methyltransferase activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.