PH01000622G0660's details annotation
1.Annotation
ICBR annotation: cyclase/dehydrase family protein, expressed
Blast result AT4G01650 : 5.30E-53
Blast annotation: Polyketide cyclase / dehydrase and lipid transport protein
2.Location
Scaffold: PH01000622
Strand: -
| Region | Start | End |
| gene | 473782 | 477519 |
| mRNA | 473782 | 477519 |
| exon | 473782 | 473924 |
| exon | 474597 | 474794 |
| exon | 475227 | 475397 |
| exon | 475487 | 477519 |
| CDS | 473811 | 473924 |
| CDS | 474597 | 474794 |
| CDS | 475227 | 475397 |
| CDS | 475487 | 475933 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF03364.19 | Polyketide_cyc | 108 | 256 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.