Annotation of co-expression genes

PH01000624G0870's details annotation

1.Annotation

ICBR annotation: diacylglycerol kinase, putative, expressed

Blast result AT2G20900 : 0.00E+00
Blast annotation: diacylglycerol kinase 5

2.Location

Scaffold: PH01000624
Strand: -

RegionStartEnd
gene590478595298
mRNA590478595298
exon590478590985
exon591114591230
exon591436591523
exon591711591788
exon592255592322
exon592467592549
exon592850592898
exon593117593240
exon593938594000
exon594074594159
exon594651594772
exon594918594996
exon595077595298
CDS590647590985
CDS591114591230
CDS591436591523
CDS591711591788
CDS592255592322
CDS592467592549
CDS592850592898
CDS593117593240
CDS593938594000
CDS594074594159
CDS594651594772
CDS594918594996
CDS595077595298

UCSC genome browser

3.Network

Co-expression Network CategoryGlobal NetworkConditional Network
Co-expression Positive Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Co-expression Negative Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Predict protein-portein interaction null
miRNA-targets relationshipnull
 

4.Functional module

MethodModule IDFunction Annotation
coexpression networknullnull

5.Cis-elements

Details in 3kb promoter region

6.Expression profilings


7.Gene family

CategoryFamily
nullnull

8.Protein domain

Pfam AccessionPfam AnnotationAlignment StartAlignment Start
PF00781.23DAGK_cat45153
PF00609.18DAGK_acc242417

9.KEGG Pathway

PathwayKEGG OrthologPathway IDKO
nullnullnullnull

10.Gene Ontology

GO AccessionGO Annotation
GO:0003951NAD+ kinase activity
GO:0004143diacylglycerol kinase activity
GO:0007205protein kinase C-activating G-protein coupled receptor signaling pathway
GO:0008152metabolic process

Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.