PH01000639G0680's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT5G24000 : 3.00E-114
Blast annotation: Protein of unknown function (DUF819)
2.Location
Scaffold: PH01000639
Strand: +
| Region | Start | End |
| gene | 428642 | 430873 |
| mRNA | 428642 | 430873 |
| exon | 428642 | 429104 |
| exon | 429240 | 429469 |
| exon | 429814 | 429924 |
| exon | 430064 | 430216 |
| exon | 430298 | 430873 |
| CDS | 428821 | 429104 |
| CDS | 429240 | 429469 |
| CDS | 429814 | 429924 |
| CDS | 430064 | 430216 |
| CDS | 430298 | 430869 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF05684.11 | DUF819 | 84 | 445 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.