PH01000647G0370's details annotation
1.Annotation
ICBR annotation: phosphate transporter 1, putative, expressed
Blast result AT1G68740 : 0.00E+00
Blast annotation: EXS (ERD1/XPR1/SYG1) family protein
2.Location
Scaffold: PH01000647
Strand: +
| Region | Start | End |
| gene | 399334 | 404542 |
| mRNA | 399334 | 404542 |
| exon | 399334 | 399887 |
| exon | 400075 | 400408 |
| exon | 401380 | 401821 |
| exon | 401900 | 401948 |
| exon | 402041 | 402112 |
| exon | 402205 | 402334 |
| exon | 402417 | 402892 |
| exon | 402985 | 403089 |
| exon | 403185 | 403229 |
| exon | 403464 | 403616 |
| exon | 403718 | 403996 |
| exon | 404088 | 404224 |
| exon | 404313 | 404542 |
| CDS | 399636 | 399887 |
| CDS | 400075 | 400408 |
| CDS | 401380 | 401821 |
| CDS | 401900 | 401948 |
| CDS | 402041 | 402112 |
| CDS | 402205 | 402334 |
| CDS | 402417 | 402892 |
| CDS | 402985 | 403089 |
| CDS | 403185 | 403229 |
| CDS | 403464 | 403616 |
| CDS | 403718 | 403996 |
| CDS | 404088 | 404224 |
| CDS | 404313 | 404400 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF03105.18 | SPX | 32 | 68 |
| PF03105.18 | SPX | 79 | 373 |
| PF03124.13 | EXS | 503 | 831 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016021 | integral to membrane |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.