Annotation of co-expression genes

PH01000661G0760's details annotation

1.Annotation

ICBR annotation: flavoprotein wrbA, putative, expressed

Blast result AT4G36750 : 1.00E-33
Blast annotation: Quinone reductase family protein

2.Location

Scaffold: PH01000661
Strand: +

RegionStartEnd
gene487893490406
mRNA487893490406
exon487893489090
exon489955490406
CDS488774489090
CDS489955490183

UCSC genome browser

3.Network

Co-expression Network CategoryGlobal NetworkConditional Network
Co-expression Positive Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Co-expression Negative Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Predict protein-portein interaction null
miRNA-targets relationshipnull
 

4.Functional module

MethodModule IDFunction Annotation
coexpression networknullnull

5.Cis-elements

Details in 3kb promoter region

6.Expression profilings


7.Gene family

CategoryFamily
nullnull

8.Protein domain

Pfam AccessionPfam AnnotationAlignment StartAlignment Start
nullnullnullnull

9.KEGG Pathway

PathwayKEGG OrthologPathway IDKO
nullnullnullnull

10.Gene Ontology

GO AccessionGO Annotation
nullnull

Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.