PH01000662G0490's details annotation
1.Annotation
ICBR annotation: SET domain protein SDG117, putative, expressed
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01000662
Strand: +
| Region | Start | End |
| gene | 307829 | 311817 |
| mRNA | 307829 | 311817 |
| exon | 307829 | 309512 |
| exon | 310260 | 310397 |
| exon | 310496 | 310583 |
| exon | 310674 | 311817 |
| CDS | 309457 | 309512 |
| CDS | 310260 | 310397 |
| CDS | 310496 | 310583 |
| CDS | 310674 | 310781 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| Transcription_Regulator(from iTAK) | SET |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00856.27 | SET | 39 | 105 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005515 | protein binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.