PH01000674G0710's details annotation 1.Annotation ICBR annotation: syntaxin, putative, expressed
Blast result AT3G03800 : 2.20E-86 Blast annotation: syntaxin of plants 131 2.Location Scaffold: PH01000674 Strand: - Region | Start | End | gene | 479444 | 482937 | mRNA | 479444 | 482937 | exon | 479444 | 479959 | exon | 480051 | 480116 | exon | 480194 | 480274 | exon | 480331 | 480444 | exon | 480533 | 480558 | exon | 480664 | 480724 | exon | 480978 | 481020 | exon | 481112 | 481185 | exon | 481328 | 481416 | exon | 481522 | 481570 | exon | 481848 | 481904 | exon | 482109 | 482225 | exon | 482296 | 482937 | CDS | 479801 | 479959 | CDS | 480051 | 480116 | CDS | 480194 | 480274 | CDS | 480331 | 480444 | CDS | 480533 | 480558 | CDS | 480664 | 480724 | CDS | 480978 | 481020 | CDS | 481112 | 481185 | CDS | 481328 | 481416 | CDS | 481522 | 481570 | CDS | 481848 | 481904 | CDS | 482109 | 482225 | CDS | 482296 | 482337 |
UCSC genome browser 3.Network  4.Functional module Method | Module ID | Function Annotation | coexpression network | null | null |
5.Cis-elements Details in 3kb promoter region 6.Expression profilings
7.Gene family
8.Protein domain Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start | PF00804.24 | Syntaxin | 40 | 244 | PF05739.18 | SNARE | 245 | 297 |
9.KEGG Pathway Pathway | KEGG Ortholog | Pathway ID | KO | SNARE interactions in vesicular transport | syntaxin 1B/2/3 | ko04130 | K08486 |
10.Gene Ontology GO Accession | GO Annotation | GO:0005484 | SNAP receptor activity | GO:0005515 | protein binding | GO:0006886 | intracellular protein transport | GO:0016020 | membrane | GO:0016192 | vesicle-mediated transport |
|