PH01000685G0120's details annotation
1.Annotation
ICBR annotation: macrophage erythroblast attacher, putative, expressed
Blast result AT3G55070 : 3.30E-94
Blast annotation: LisH/CRA/RING-U-box domains-containing protein
2.Location
Scaffold: PH01000685
Strand: -
| Region | Start | End |
| gene | 65978 | 71108 |
| mRNA | 65978 | 71108 |
| exon | 65978 | 66888 |
| exon | 66971 | 67157 |
| exon | 67321 | 67385 |
| exon | 67585 | 67770 |
| exon | 68254 | 68376 |
| exon | 69792 | 69856 |
| exon | 70013 | 71108 |
| CDS | 66787 | 66888 |
| CDS | 66971 | 67157 |
| CDS | 67321 | 67385 |
| CDS | 67585 | 67770 |
| CDS | 68254 | 68376 |
| CDS | 69792 | 69856 |
| CDS | 70013 | 70280 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM001044 |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF10607.8 | CLTH | 119 | 250 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.