PH01000690G0340's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT5G17160 : 2.10E-17
Blast annotation: -
2.Location
Scaffold: PH01000690
Strand: +
| Region | Start | End |
| gene | 235811 | 239508 |
| mRNA | 235811 | 239508 |
| exon | 235811 | 236816 |
| exon | 236951 | 237509 |
| exon | 237598 | 237702 |
| exon | 237828 | 237944 |
| exon | 238190 | 239304 |
| exon | 239408 | 239508 |
| CDS | 236673 | 236816 |
| CDS | 236951 | 237509 |
| CDS | 237598 | 237702 |
| CDS | 237828 | 237944 |
| CDS | 238190 | 239304 |
| CDS | 239408 | 239488 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.