PH01000695G0190's details annotation
1.Annotation
ICBR annotation: nodulin MtN3 family protein, putative, expressed
Blast result AT3G48740 : 8.50E-77
Blast annotation: Nodulin MtN3 family protein
2.Location
Scaffold: PH01000695
Strand: +
| Region | Start | End |
| gene | 150540 | 153160 |
| mRNA | 150540 | 153160 |
| exon | 150540 | 150841 |
| exon | 151416 | 151452 |
| exon | 151866 | 152238 |
| exon | 152324 | 152443 |
| exon | 152546 | 153160 |
| CDS | 150790 | 150841 |
| CDS | 151416 | 151452 |
| CDS | 151866 | 152238 |
| CDS | 152324 | 152443 |
| CDS | 152546 | 152857 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF03083.15 | MtN3_slv | 14 | 98 |
| PF03083.15 | MtN3_slv | 134 | 216 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016021 | integral to membrane |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.