PH01000716G0450's details annotation
1.Annotation
ICBR annotation: UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed
Blast result AT3G02100 : 1.60E-97
Blast annotation: UDP-Glycosyltransferase superfamily protein
2.Location
Scaffold: PH01000716
Strand: +
| Region | Start | End |
| gene | 254722 | 259038 |
| mRNA | 254722 | 259038 |
| exon | 254722 | 255484 |
| exon | 256510 | 257045 |
| exon | 257161 | 259038 |
| CDS | 255001 | 255484 |
| CDS | 256510 | 257045 |
| CDS | 257161 | 257508 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM001324 | Valine,_leucine_and_isoleucine_degradation Benzoate_degradation metabolic process, Biosynthesis_of_unsaturated_fatty_acids Fatty_acid_metabolism alpha-Linolenic_acid_metabolism |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00201.17 | UDPGT | 262 | 423 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0008152 | metabolic process |
| GO:0016758 | transferase activity, transferring hexosyl groups |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.