PH01000728G0130's details annotation
1.Annotation
ICBR annotation: membrane protein, putative, expressed
Blast result AT2G36630 : 3.80E-54
Blast annotation: Sulfite exporter TauE/SafE family protein
2.Location
Scaffold: PH01000728
Strand: -
| Region | Start | End |
| gene | 99344 | 103347 |
| mRNA | 99344 | 103347 |
| exon | 99344 | 99512 |
| exon | 99844 | 99984 |
| exon | 100077 | 100170 |
| exon | 102066 | 102305 |
| exon | 102693 | 102743 |
| exon | 103303 | 103347 |
| CDS | 99436 | 99512 |
| CDS | 99844 | 99984 |
| CDS | 100077 | 100170 |
| CDS | 102066 | 102305 |
| CDS | 102693 | 102743 |
| CDS | 103303 | 103308 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01925.18 | TauE | 33 | 167 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016021 | integral to membrane |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.