PH01000737G0530's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT2G32590 : 1.50E-94
Blast annotation: -
2.Location
Scaffold: PH01000737
Strand: +
| Region | Start | End |
| gene | 364099 | 375092 |
| mRNA | 364099 | 375092 |
| exon | 364099 | 364996 |
| exon | 365134 | 365189 |
| exon | 366060 | 366096 |
| exon | 366325 | 366381 |
| exon | 367578 | 367679 |
| exon | 367789 | 367906 |
| exon | 368365 | 368435 |
| exon | 368518 | 368578 |
| exon | 368676 | 368876 |
| exon | 368964 | 369253 |
| exon | 369660 | 369813 |
| exon | 370161 | 370201 |
| exon | 370234 | 370264 |
| exon | 370756 | 370895 |
| exon | 372098 | 372151 |
| exon | 373468 | 373578 |
| exon | 374311 | 374349 |
| exon | 374743 | 375092 |
| CDS | 364913 | 364996 |
| CDS | 365134 | 365189 |
| CDS | 366060 | 366096 |
| CDS | 366325 | 366381 |
| CDS | 367578 | 367679 |
| CDS | 367789 | 367906 |
| CDS | 368365 | 368435 |
| CDS | 368518 | 368578 |
| CDS | 368676 | 368876 |
| CDS | 368964 | 369253 |
| CDS | 369660 | 369813 |
| CDS | 370161 | 370201 |
| CDS | 370234 | 370264 |
| CDS | 370756 | 370895 |
| CDS | 372098 | 372151 |
| CDS | 373468 | 373578 |
| CDS | 374311 | 374349 |
| CDS | 374743 | 374838 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF05786.13 | Cnd2 | 67 | 417 |
| PF05786.13 | Cnd2 | 436 | 543 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.