PH01000738G0280's details annotation
1.Annotation
ICBR annotation: reticulon domain containing protein, putative, expressed
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01000738
Strand: -
| Region | Start | End |
| gene | 282924 | 287618 |
| mRNA | 282924 | 287618 |
| exon | 282924 | 283856 |
| exon | 284518 | 284620 |
| exon | 284715 | 284770 |
| exon | 284862 | 284931 |
| exon | 285225 | 285309 |
| exon | 285400 | 285550 |
| exon | 287208 | 287618 |
| CDS | 283741 | 283856 |
| CDS | 284518 | 284620 |
| CDS | 284715 | 284770 |
| CDS | 284862 | 284931 |
| CDS | 285225 | 285309 |
| CDS | 285400 | 285550 |
| CDS | 287208 | 287508 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM001009 | |
| coexpression network | CFinderM001015 | DNA primase activity, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.