PH01000800G0350's details annotation
1.Annotation
ICBR annotation: ENT domain containing protein, expressed
Blast result AT5G13020 : 1.10E-59
Blast annotation: Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein
2.Location
Scaffold: PH01000800
Strand: -
| Region | Start | End |
| gene | 315624 | 319032 |
| mRNA | 315624 | 319032 |
| exon | 315624 | 315796 |
| exon | 315871 | 316083 |
| exon | 316199 | 316451 |
| exon | 316544 | 316653 |
| exon | 316757 | 316968 |
| exon | 318660 | 319032 |
| CDS | 315695 | 315796 |
| CDS | 315871 | 316083 |
| CDS | 316199 | 316451 |
| CDS | 316544 | 316653 |
| CDS | 316757 | 316968 |
| CDS | 318660 | 318687 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF03735.13 | ENT | 54 | 121 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.