PH01000804G0170's details annotation
1.Annotation
ICBR annotation: protein kinase family protein, putative, expressed
Blast result AT5G59010 : 2.30E-70
Blast annotation: Protein kinase protein with tetratricopeptide repeat domain
2.Location
Scaffold: PH01000804
Strand: +
| Region | Start | End |
| gene | 117639 | 121512 |
| mRNA | 117639 | 121512 |
| exon | 117639 | 118301 |
| exon | 118870 | 119096 |
| exon | 119179 | 119314 |
| exon | 119879 | 120012 |
| exon | 120525 | 120569 |
| exon | 120820 | 121512 |
| CDS | 118235 | 118301 |
| CDS | 118870 | 119096 |
| CDS | 119179 | 119314 |
| CDS | 119879 | 120012 |
| CDS | 120525 | 120569 |
| CDS | 120820 | 121074 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF07714.16 | Pkinase_Tyr | 68 | 191 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0004672 | protein kinase activity |
| GO:0005515 | protein binding |
| GO:0005524 | ATP binding |
| GO:0006468 | protein phosphorylation |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.