PH01000880G0230's details annotation
1.Annotation
ICBR annotation: IQ calmodulin-binding motif family protein, putative, expressed
Blast result AT4G14750 : 6.80E-33
Blast annotation: IQ-domain 19
2.Location
Scaffold: PH01000880
Strand: -
| Region | Start | End |
| gene | 190509 | 193083 |
| mRNA | 190509 | 193083 |
| exon | 190509 | 191976 |
| exon | 192056 | 192292 |
| exon | 192599 | 193083 |
| CDS | 191356 | 191976 |
| CDS | 192056 | 192292 |
| CDS | 192599 | 192844 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF13178.5 | DUF4005 | 182 | 310 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005515 | protein binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.