PH01000897G0530's details annotation
1.Annotation
ICBR annotation: aquaporin protein, putative, expressed
Blast result AT3G04090 : 2.70E-50
Blast annotation: small and basic intrinsic protein 1A
2.Location
Scaffold: PH01000897
Strand: +
| Region | Start | End |
| gene | 382308 | 385314 |
| mRNA | 382308 | 385314 |
| exon | 382308 | 382993 |
| exon | 383084 | 383356 |
| exon | 385025 | 385314 |
| CDS | 382685 | 382993 |
| CDS | 383084 | 383356 |
| CDS | 385025 | 385180 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00230.19 | MIP | 6 | 231 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005215 | transporter activity |
| GO:0006810 | transport |
| GO:0016020 | membrane |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.