PH01000900G0270's details annotation
1.Annotation
ICBR annotation: phospholipase D. Active site motif family protein, expressed
Blast result AT3G16785 : 2.70E-43
Blast annotation: phospholipase D P1
2.Location
Scaffold: PH01000900
Strand: -
| Region | Start | End |
| gene | 169618 | 171731 |
| mRNA | 169618 | 171731 |
| exon | 169618 | 170106 |
| exon | 170326 | 170391 |
| exon | 170614 | 170632 |
| exon | 170968 | 171731 |
| CDS | 169702 | 170106 |
| CDS | 170326 | 170391 |
| CDS | 170614 | 170632 |
| CDS | 170968 | 171422 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.