PH01000903G0360's details annotation
1.Annotation
ICBR annotation: ferrochelatase-2, chloroplast precursor, putative, expressed
Blast result AT5G26030 : 2.30E-71
Blast annotation: ferrochelatase 1
2.Location
Scaffold: PH01000903
Strand: +
| Region | Start | End |
| gene | 192729 | 195314 |
| mRNA | 192729 | 195314 |
| exon | 192729 | 192814 |
| exon | 192993 | 193128 |
| exon | 193366 | 193466 |
| exon | 194136 | 195314 |
| CDS | 192801 | 192814 |
| CDS | 192993 | 193128 |
| CDS | 193366 | 193466 |
| CDS | 194136 | 194451 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00762.18 | Ferrochelatase | 6 | 135 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0004325 | ferrochelatase activity |
| GO:0006783 | heme biosynthetic process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.