PH01000905G0170's details annotation
1.Annotation
ICBR annotation: ATP10 protein, expressed
Blast result AT1G08220 : 1.20E-20
Blast annotation: -
2.Location
Scaffold: PH01000905
Strand: +
| Region | Start | End |
| gene | 124161 | 126434 |
| mRNA | 124161 | 126434 |
| exon | 124161 | 124848 |
| exon | 125111 | 125179 |
| exon | 125275 | 125472 |
| exon | 125536 | 126434 |
| CDS | 124720 | 124848 |
| CDS | 125111 | 125179 |
| CDS | 125275 | 125472 |
| CDS | 125536 | 125550 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF05176.13 | ATP-synt_10 | 47 | 132 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005743 | mitochondrial inner membrane |
| GO:0033615 | mitochondrial proton-transporting ATP synthase complex assembly |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.