PH01000906G0170's details annotation
1.Annotation
ICBR annotation: 2-aminoethanethiol dioxygenase, putative, expressed
Blast result AT5G39890 : 4.00E-68
Blast annotation: Protein of unknown function (DUF1637)
2.Location
Scaffold: PH01000906
Strand: +
| Region | Start | End |
| gene | 101422 | 105047 |
| mRNA | 101422 | 105047 |
| exon | 101422 | 102480 |
| exon | 104203 | 104321 |
| exon | 104430 | 104568 |
| exon | 104662 | 105047 |
| CDS | 102363 | 102480 |
| CDS | 104203 | 104321 |
| CDS | 104430 | 104568 |
| CDS | 104662 | 104918 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF07847.11 | PCO_ADO | 75 | 272 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0047800 | cysteamine dioxygenase activity |
| GO:0055114 | oxidation-reduction process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.