PH01000910G0100's details annotation
1.Annotation
ICBR annotation: DUF1336 domain containing protein, expressed
Blast result AT3G29180 : 3.00E-140
Blast annotation: Protein of unknown function (DUF1336)
2.Location
Scaffold: PH01000910
Strand: -
| Region | Start | End |
| gene | 71967 | 75836 |
| mRNA | 71967 | 75836 |
| exon | 71967 | 72817 |
| exon | 73385 | 73507 |
| exon | 73588 | 73782 |
| exon | 73893 | 74021 |
| exon | 74099 | 74261 |
| exon | 74345 | 74477 |
| exon | 74571 | 75086 |
| exon | 75170 | 75253 |
| exon | 75355 | 75836 |
| CDS | 72704 | 72817 |
| CDS | 73385 | 73507 |
| CDS | 73588 | 73782 |
| CDS | 73893 | 74021 |
| CDS | 74099 | 74261 |
| CDS | 74345 | 74477 |
| CDS | 74571 | 75086 |
| CDS | 75170 | 75253 |
| CDS | 75355 | 75613 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF07059.11 | DUF1336 | 314 | 555 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.