PH01000949G0050's details annotation
1.Annotation
ICBR annotation: CRAL/TRIO domain containing protein, expressed
Blast result AT1G22180 : 5.30E-66
Blast annotation: Sec14p-like phosphatidylinositol transfer family protein
2.Location
Scaffold: PH01000949
Strand: +
| Region | Start | End |
| gene | 14205 | 16238 |
| mRNA | 14205 | 16238 |
| exon | 14205 | 14655 |
| exon | 14802 | 14978 |
| exon | 15238 | 15336 |
| exon | 15509 | 16238 |
| CDS | 14581 | 14655 |
| CDS | 14802 | 14978 |
| CDS | 15238 | 15336 |
| CDS | 15509 | 16150 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00650.19 | CRAL_TRIO | 91 | 245 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.