PH01000950G0320's details annotation
1.Annotation
ICBR annotation: Spc97 / Spc98 family protein, putative, expressed
Blast result AT5G06680 : 0.00E+00
Blast annotation: spindle pole body component 98
2.Location
Scaffold: PH01000950
Strand: +
| Region | Start | End |
| gene | 176547 | 180587 |
| mRNA | 176547 | 180587 |
| exon | 176547 | 180211 |
| exon | 180312 | 180587 |
| CDS | 177966 | 180211 |
| CDS | 180312 | 180567 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF04130.12 | Spc97_Spc98 | 185 | 709 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0000226 | microtubule cytoskeleton organization |
| GO:0000922 | spindle pole |
| GO:0005815 | microtubule organizing center |
| GO:0005856 | cytoskeleton |
| GO:0007020 | microtubule nucleation |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.