PH01000980G0280's details annotation
1.Annotation
ICBR annotation: methyltransferase, putative, expressed
Blast result AT3G60910 : 6.70E-37
Blast annotation: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
2.Location
Scaffold: PH01000980
Strand: -
| Region | Start | End |
| gene | 186668 | 190941 |
| mRNA | 186668 | 190941 |
| exon | 186668 | 187328 |
| exon | 187668 | 187749 |
| exon | 187830 | 187860 |
| exon | 187957 | 188009 |
| exon | 188102 | 188121 |
| exon | 188285 | 188353 |
| exon | 188436 | 188549 |
| exon | 188978 | 190941 |
| CDS | 187126 | 187328 |
| CDS | 187668 | 187749 |
| CDS | 187830 | 187860 |
| CDS | 187957 | 188009 |
| CDS | 188102 | 188121 |
| CDS | 188285 | 188353 |
| CDS | 188436 | 188549 |
| CDS | 188978 | 189179 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.