PH01000992G0190's details annotation
1.Annotation
ICBR annotation: ATKINESIN-13A/KINESIN-13A, putative, expressed
Blast result AT3G16630 : 1.80E-51
Blast annotation: P-loop containing nucleoside triphosphate hydrolases superfamily protein
2.Location
Scaffold: PH01000992
Strand: -
| Region | Start | End |
| gene | 145026 | 148639 |
| mRNA | 145026 | 148639 |
| exon | 145026 | 145231 |
| exon | 145567 | 145671 |
| exon | 145809 | 145994 |
| exon | 146218 | 146451 |
| exon | 147957 | 148639 |
| CDS | 145052 | 145231 |
| CDS | 145567 | 145671 |
| CDS | 145809 | 145994 |
| CDS | 146218 | 146451 |
| CDS | 147957 | 148115 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003777 | microtubule motor activity |
| GO:0005524 | ATP binding |
| GO:0005875 | microtubule associated complex |
| GO:0007018 | microtubule-based movement |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.