PH01001075G0130's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT5G13970 : 3.00E-28
Blast annotation: -
2.Location
Scaffold: PH01001075
Strand: +
| Region | Start | End |
| gene | 72184 | 75857 |
| mRNA | 72184 | 75857 |
| exon | 72184 | 72842 |
| exon | 73141 | 73229 |
| exon | 73736 | 73799 |
| exon | 74928 | 75857 |
| CDS | 72411 | 72842 |
| CDS | 73141 | 73229 |
| CDS | 73736 | 73799 |
| CDS | 74928 | 75821 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000206 | mitochondrial inner membrane presequence translocase complex, P-P-bond-hydrolysis-driven protein transmembrane transporter activity, Others Transcription_Regulator(from iTAK) two-component response regulator activity, Protein_processing_in_endoplasmic_reticulum |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.