PH01001077G0410's details annotation
1.Annotation
ICBR annotation: OsSub22 - Putative Subtilisin homologue, expressed
Blast result AT3G14067 : 1.00E-170
Blast annotation: Subtilase family protein
2.Location
Scaffold: PH01001077
Strand: +
| Region | Start | End |
| gene | 265580 | 268252 |
| mRNA | 265580 | 268252 |
| exon | 265580 | 266432 |
| exon | 266535 | 268252 |
| CDS | 265713 | 266432 |
| CDS | 266535 | 268091 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF05922.15 | Inhibitor_I9 | 38 | 120 |
| PF00082.21 | Peptidase_S8 | 249 | 569 |
| PF02225.21 | PA | 360 | 444 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0004252 | serine-type endopeptidase activity |
| GO:0006508 | proteolysis |
| GO:0042802 | identical protein binding |
| GO:0043086 | negative regulation of catalytic activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.