PH01001104G0460's details annotation
1.Annotation
ICBR annotation: protein phosphatase inhibitor 2 containing protein, expressed
Blast result AT5G52200 : 6.60E-31
Blast annotation: phosphoprotein phosphatase inhibitors
2.Location
Scaffold: PH01001104
Strand: -
| Region | Start | End |
| gene | 322852 | 326873 |
| mRNA | 322852 | 326873 |
| exon | 322852 | 323191 |
| exon | 323868 | 324035 |
| exon | 324132 | 324247 |
| exon | 326078 | 326873 |
| CDS | 322989 | 323191 |
| CDS | 323868 | 324035 |
| CDS | 324132 | 324247 |
| CDS | 326078 | 326082 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF04979.13 | IPP-2 | 6 | 136 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0004864 | protein phosphatase inhibitor activity |
| GO:0009966 | regulation of signal transduction |
| GO:0043666 | regulation of phosphoprotein phosphatase activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.